UniProtKB/Swiss-Prot P10636 : Variant p.Pro618Ser
Microtubule-associated protein tau
Gene: MAPT
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Variant information
Variant position:
618
The position of the amino-acid change on the UniProtKB canonical protein sequence.
Type of variant:
LP/P [Disclaimer : Variants classification is intended for research purposes only, not for clinical and diagnostic use . The label disease variant is assigned according to literature reports on probable disease-association that can be based on theoretical reasons. This label must not be considered as a definitive proof for the pathogenic role of a variant. ]
The variants are classified into three categories: LP/P, LB/B and US.LP/P: likely pathogenic or pathogenic. LB/B: likely benign or benign. US: uncertain significance
Residue change:
From Proline (P) to Serine (S) at position 618 (P618S, p.Pro618Ser).
Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.
Physico-chemical properties:
Change from medium size and hydrophobic (P) to small size and polar (S)
The physico-chemical property of the reference and variant residues and the change implicated.
BLOSUM score:
-1
The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another: Lowest score: -4 (low probability of substitution).Highest score: 11 (high probability of substitution). More information can be found on the following page
Variant description:
In FTD and CBD; reduction in the ability to promote microtubule assembly.
Any additional useful information about the variant.
Other resources:
Links to websites of interest for the variant.
Sequence information
Variant position:
618
The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length:
758
The length of the canonical sequence.
Location on the sequence:
KLDLSNVQSKCGSKDNIKHV
P GGGSVQIVYKPVDLSKVTSK
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation:
The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human KLDLSNVQSKCGSKDNIKHVP GGGSVQIVYKPVDLSKVTSK
Gorilla KLDLSNVQSKCGSKDNIKHVP GGGSVQIVYKPVDLSKVTSK
Rhesus macaque KLDLSNVQSKCGSKDNIKHVP GGGSVQIVYKPVDLSKVTSK
Chimpanzee KLDLSNVQSKCGSKDNIKHVP GGGSVQIVYKPVDLSKVTSK
Mouse KLDLSNVQSKCGSKDNIKHVP GGGSVQIVYKPVDLSKVTSK
Rat KLDLSNVQSKCGSKDNIKHVP GGGSVHIVYKPVDLSKVTSK
Bovine KLDLSNVQSKCGSKDNIKHVP GGGSVQIVYKPVDLSKVTSK
Goat KLDLSNVQSKCGSKDNIKHVP GGGSVQIVYKPVDLSKVTSK
Sequence annotation in neighborhood:
The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
Chain
2 – 758
Microtubule-associated protein tau
Repeat
592 – 622
Tau/MAP 2
Region
561 – 685
Microtubule-binding domain
Site
607 – 607
Not glycated
Site
611 – 611
Not glycated
Site
615 – 615
Not glycated
Site
628 – 628
Not glycated
Site
634 – 634
Not glycated
Site
638 – 638
Not glycated
Modified residue
598 – 598
N6-acetyllysine; alternate
Modified residue
602 – 602
Phosphoserine; by PHK
Modified residue
607 – 607
N6-acetyllysine
Modified residue
610 – 610
Phosphoserine
Modified residue
615 – 615
N6-acetyllysine; alternate
Modified residue
622 – 622
Phosphoserine; by PHK
Modified residue
628 – 628
N6,N6-dimethyllysine; alternate
Modified residue
628 – 628
N6-acetyllysine; alternate
Modified residue
634 – 634
N6-acetyllysine; alternate
Modified residue
638 – 638
N6-acetyllysine; alternate
Glycosylation
598 – 598
N-linked (Glc) (glycation) lysine; in PHF-tau; in vitro
Disulfide bond
608 – 639
Cross
598 – 598
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate
Cross
615 – 615
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate
Cross
628 – 628
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); in PHF-tau
Cross
634 – 634
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate
Cross
638 – 638
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate
Alternative sequence
592 – 622
Missing. In isoform Tau-A, isoform Tau-B, isoform Tau-C and isoform Fetal-tau.
Beta strand
618 – 620
Literature citations
FTDP-17: an early-onset phenotype with parkinsonism and epileptic seizures caused by a novel mutation.
Sperfeld A.D.; Collatz M.B.; Baier H.; Palmbach M.; Storch A.; Schwarz J.; Tatsch K.; Reske S.; Joosse M.; Heutink P.; Ludolph A.C.;
Ann. Neurol. 46:708-715(1999)
Cited for: VARIANT FTD SER-618;
Frontotemporal dementia and corticobasal degeneration in a family with a P301S mutation in tau.
Bugiani O.; Murrell J.R.; Giaccone G.; Hasegawa M.; Ghigo G.; Tabaton M.; Morbin M.; Primavera A.; Carella F.; Solaro C.; Grisoli M.; Savoiardo M.; Spillantini M.G.; Tagliavini F.; Goedert M.; Ghetti B.;
J. Neuropathol. Exp. Neurol. 58:667-677(1999)
Cited for: VARIANT FTD/CBD SER-618;
A Japanese patient with frontotemporal dementia and parkinsonism by a tau P301S mutation.
Yasuda M.; Yokoyama K.; Nakayasu T.; Nishimura Y.; Matsui M.; Yokoyama T.; Miyoshi K.; Tanaka C.;
Neurology 55:1224-1227(2000)
Cited for: VARIANT FTD SER-618;
Phenotypic heterogeneity within a new family with the MAPT P301S mutation.
Yasuda M.; Nakamura Y.; Kawamata T.; Kaneyuki H.; Maeda K.; Komure O.;
Ann. Neurol. 58:920-928(2005)
Cited for: VARIANT FTD SER-618;
Disclaimer:
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.