UniProtKB/SwissProt variant VAR

Variant information

Variant position:

671

The position of the amino-acid change on the UniProtKB canonical protein sequence.

Type of variant:

Polymorphism

The variants are classified into three categories: Disease, Polymorphism and Unclassified.

Disease: Variants implicated in disease according to literature reports.
Polymorphism: Variants not reported to be implicated in disease.
Unclassified: Variants with uncertain implication in disease according to literature reports. Evidence against or in favor of a pathogenic role is limited and/or conflicting.

Residue change:

From Glycine (G) to Valine (V) at position 671 (G671V, p.Gly671Val).

Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.

Physico-chemical properties:

Change from glycine (G) to medium size and hydrophobic (V)

The physico-chemical property of the reference and variant residues and the change implicated.

BLOSUM score:

-3

The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another:

Lowest score: -4 (low probability of substitution).
Highest score: 11 (high probability of substitution).

More information can be found on the following page

Variant description:

No effect on leukotriene C4 and estradiol glucuronide transport.

Any additional useful information about the variant.

Other resources:

Links to websites of interest for the variant.

Variant rs45511401 [ dbSNP | Ensembl ]

Sequence information

Variant position:

671

The position of the amino-acid change on the UniProtKB canonical protein sequence.

Protein sequence length:

1531

The length of the canonical sequence.

Location on the sequence:

FTWARSDPPTLNGITFSIPE G ALVAVVGQVGCGKSSLLSAL

The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.

Sequence annotation in neighborhood:

The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:

Type: the type of sequence feature.
Positions: endpoints of the sequence feature.
Description: contains additional information about the feature.

Type	Positions	Description
Chain	1 – 1531	Multidrug resistance-associated protein 1
Topological domain	612 – 967	Cytoplasmic
Domain	644 – 868	ABC transporter 1
Binding site	653 – 653	ATP 1

Literature citations

Submission
NIEHS SNPs program;
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]; VARIANTS VAL-671; GLN-723; THR-861; SER-1047 AND ILE-1146;

Mutations in a gene encoding an ABC transporter cause pseudoxanthoma elasticum.
Le Saux O.; Urban Z.; Tschuch C.; Csiszar K.; Bacchelli B.; Quaglino D.; Pasquali-Ronchetti I.; Pope F.M.; Richards A.; Terry S.; Bercovitch L.; de Paepe A.; Boyd C.D.;
Nat. Genet. 25:223-227(2000)
Cited for: VARIANTS GLN-633 AND VAL-671;

Pseudoxanthoma elasticum: mutations in the MRP6 gene encoding a transmembrane ATP-binding cassette (ABC) transporter.
Ringpfeil F.; Lebwohl M.G.; Christiano A.M.; Uitto J.;
Proc. Natl. Acad. Sci. U.S.A. 97:6001-6006(2000)
Cited for: VARIANT VAL-671;

Identification of human multidrug resistance protein 1 (MRP1) mutations and characterization of a G671V substitution.
Conrad S.; Kauffmann H.-M.; Ito K.; Deeley R.G.; Cole S.P.C.; Schrenk D.;
J. Hum. Genet. 46:656-663(2001)
Cited for: VARIANT SER-433; CHARACTERIZATION OF VARIANT VAL-671;

UniProtKB/Swiss-Prot variant pages

UniProtKB/Swiss-Prot P33527: Variant p.Gly671Val