Variant position: 59 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 873 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human QCTNGRCITLLWKCDGDEDC VDGSDEKNCVKKTCAESDFVC
Mouse QCTNGRCITLLWKCDGDEDC ADGSDEKNCVKKTCAESDFVC
Rat QCTNGRCITLLWKCDGDEDC TDGSDEKNCVKKTCAESDFVC
Rabbit QCTNGRCITQLWKCDGDEDC VDGSDEKNCVKKTCAESDFVC
Chicken QCSNGRCIPLLWKCDGDEDC SDGSDESACVKKTCAESDFVC
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
28 – 873 Very low-density lipoprotein receptor
28 – 797 Extracellular
31 – 69 LDL-receptor class A 1
52 – 67
SeattleSNPs variation discovery resource;
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]; VARIANTS ILE-59; HIS-262; ILE-464; VAL-561; HIS-613 AND ILE-791;
Characterization of single-nucleotide polymorphisms in coding regions of human genes.
Cargill M.; Altshuler D.; Ireland J.; Sklar P.; Ardlie K.; Patil N.; Shaw N.; Lane C.R.; Lim E.P.; Kalyanaraman N.; Nemesh J.; Ziaugra L.; Friedland L.; Rolfe A.; Warrington J.; Lipshutz R.; Daley G.Q.; Lander E.S.;
Nat. Genet. 22:231-238(1999)
Cited for: VARIANTS ILE-59 AND LYS-379;
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.