Variant position: 27 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 434 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human ESWNHADFVHCEDTESVPGK PSVNADEEVGGPQICRVCGDK
Rhesus macaque EGWNHADFVYCEDTEFAPGK PTVNADEEVGGPQICRVCGDK
Mouse ESWSRVGLVQCEEADSALEE P-INVEEEDGGLQICRVCGDK
Rat ERWNHVGLVQREEADSVLEE P-INVDEEDGGLQICRVCGDK
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
1 – 434 Nuclear receptor subfamily 1 group I member 2
1 – 55 Missing. In isoform 1B and isoform 2B.
The human pregnane X receptor: genomic structure and identification and functional characterization of natural allelic variants.
Zhang J.; Kuehl P.; Green E.D.; Touchman J.W.; Watkins P.B.; Daly A.; Hall S.D.; Maurel P.; Relling M.; Brimer C.; Yasuda K.; Wrighton S.A.; Hancock M.; Kim R.B.; Strom S.; Thummel K.; Russell C.G.; Hudson J.R. Jr.; Schuetz E.G.; Boguski M.S.;
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] (ISOFORMS 1A AND 3); FUNCTION; VARIANTS SER-27; ARG-36 AND GLN-122;
SeattleSNPs variation discovery resource;
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]; VARIANTS LYS-18; SER-27 AND THR-370;
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.