Variant position: 24 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 286 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human ASDGGTSESIFDLDYASWGI RSTLMVAGFVFYLGVFVVCHQ
Mouse VSSHGLAESIFDLDYASWKI RSTLAVAGFVFYLGVFVVCHQ
Rat VSNHGVAESIFDLDYASWKI RSTLAVAGFVFYLGVFVVCHQ
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
1 – 286 Protein CLN8
21 – 41 Helical
The neuronal ceroid lipofuscinoses in human EPMR and mnd mutant mice are associated with mutations in CLN8.
Ranta S.; Zhang Y.; Ross B.; Lonka L.; Takkunen E.; Messer A.; Sharp J.; Wheeler R.; Kusumi K.; Mole S.; Liu W.; Soares M.B.; Bonaldo M.F.; Hirvasniemi A.; de la Chapelle A.; Gilliam T.C.; Lehesjoki A.-E.;
Nat. Genet. 23:233-236(1999)
Cited for: NUCLEOTIDE SEQUENCE [MRNA]; VARIANT CLN8NE GLY-24; VARIANT VAL-155;
Update of the mutation spectrum and clinical correlations of over 360 mutations in eight genes that underlie the neuronal ceroid lipofuscinoses.
Kousi M.; Lehesjoki A.E.; Mole S.E.;
Hum. Mutat. 33:42-63(2012)
Cited for: VARIANTS CLN8 HIS-70; ARG-76; SER-107; TYR-139; TRP-213 DEL; SER-221; ARG-237 AND VAL-269; VARIANT CLN8NE GLY-24; VARIANTS SER-125 AND ALA-229;
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.