Variant position: 152 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 1218 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human YTLLVEAWDSSNDTVQPDSI IEKASHSGMINPSRQWQTLKQ
Mouse YTLLVEAWDSSNDTIQPDSI IEKASHSGMINPSRQWQTLKQ
Rat YTLLVEAWDSSNDTIQPDSI IEKASHSGMINPSRQWQTLKQ
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
34 – 1218 Protein jagged-1
34 – 1067 Extracellular
143 – 143 N-linked (GlcNAc...) asparagine
1 – 159 Missing. In isoform 2.
150 – 160
Jagged-1 mutation analysis in Italian Alagille syndrome patients.
Pilia G.; Uda M.; Macis D.; Frau F.; Crisponi L.; Balli F.; Barbera C.; Colombo C.; Frediani T.; Gatti R.; Iorio R.; Marazzi M.G.; Marcellini M.; Musumeci S.; Nebbia G.; Vajro P.; Ruffa G.; Zancan L.; Cao A.; DeVirgilis S.;
Hum. Mutat. 14:394-400(1999)
Cited for: VARIANTS ALGS1 THR-152 AND LEU-184;
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