Variant position: 46 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 860 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human RCERNEFQCQDGKCISYKWV CDGSAECQDGSDESQETCLSV
Mouse SCSRNEFQCRDGKCIASKWV CDGSPECPDGSDESPETCMSV
Rat SCGKNEFQCRDGKCIVSKWV CDGSRECPDGSDESPETCMSV
Bovine NCGRNEFQCQDGKCISYKWV CDGTAECQDGSDESQETCKSV
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
22 – 860 Low-density lipoprotein receptor
22 – 788 Extracellular
25 – 65 LDL-receptor class A 1
34 – 52
46 – 63
35 – 155 Missing. In isoform 6.
42 – 46
A novel mutation in exon 2 of the low-density lipoprotein-receptor gene in a patient with homozygous familial hypercholesterolemia.
Takahashi M.; Ikeda U.; Takahashi S.; Hattori H.; Iwasaki T.; Ishihara M.; Egashira T.; Honma S.; Asano Y.; Shimada K.A.;
Clin. Genet. 59:290-292(2001)
Cited for: VARIANT FHCL1 SER-46;
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