Variant position: 249 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 409 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human IPGDRESQAVVDPPQ-AASTG APQSSAVAAAAATTTATTTTT
Mouse IPGDRESQAVVDPPPQAVSTG TPQSPAVAAAAATTTATTTT
Rat IPGDRESQAVVDPPPQAVSTG TPQSPAVAAAAATTTATTTT
Bovine IPGDRESQAVVDPPP-AASTG APQSS-VAAAAATTTATTTT
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
1 – 409 UV excision repair protein RAD23 homolog B
236 – 276 Disordered
240 – 276 Polar residues
Expression of a novel RAD23B mRNA splice variant in the human testis.
Huang X.; Wang H.; Xu M.; Lu L.; Xu Z.; Li J.; Zhou Z.; Sha J.;
J. Androl. 25:363-368(2004)
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2); VARIANT VAL-249; ALTERNATIVE SPLICING; TISSUE SPECIFICITY (ISOFORM 2);
NIEHS SNPs program;
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]; VARIANT VAL-249;
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
The MGC Project Team;
Genome Res. 14:2121-2127(2004)
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1); VARIANT VAL-249;
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