Variant position: 214 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 1337 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human TWGDPRVIKVITEPIPVSDL RVALTGVRKAALSWSNGNGTA----
Mouse TLNK----TITTEPWPVSDL HVTSVGVTQARLTWSNANGTA
Chicken TEADGASISLYTKPSPVLDL KAEYVGVTSVNLTWT-VNGTA
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
36 – 1337 Receptor-type tyrosine-protein phosphatase eta
36 – 975 Extracellular
207 – 291 Fibronectin type-III 2
231 – 231 N-linked (GlcNAc...) asparagine
Ptprj is a candidate for the mouse colon-cancer susceptibility locus Scc1 and is frequently deleted in human cancers.
Ruivenkamp C.A.L.; van Wezel T.; Zanon C.; Stassen A.P.M.; Vlcek C.; Csikos T.; Klous A.M.; Tripodis N.; Perrakis A.; Boerrigter L.; Groot P.C.; Lindeman J.; Mooi W.J.; Meijjer G.A.; Scholten G.; Dauwerse H.; Paces V.; van Zandwijk N.; van Ommen G.J.B.; Demant P.;
Nat. Genet. 31:295-300(2002)
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 33-1337; VARIANTS CYS-214; PRO-276 AND ASP-872;
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.