UniProtKB/Swiss-Prot P06213 : Variant p.Pro997Thr
Insulin receptor
Gene: INSR
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Variant information
Variant position:
997
The position of the amino-acid change on the UniProtKB canonical protein sequence.
Type of variant:
LP/P [Disclaimer : Variants classification is intended for research purposes only, not for clinical and diagnostic use . The label disease variant is assigned according to literature reports on probable disease-association that can be based on theoretical reasons. This label must not be considered as a definitive proof for the pathogenic role of a variant. ]
The variants are classified into three categories: LP/P, LB/B and US.LP/P: likely pathogenic or pathogenic. LB/B: likely benign or benign. US: uncertain significance
Residue change:
From Proline (P) to Threonine (T) at position 997 (P997T, p.Pro997Thr).
Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.
Physico-chemical properties:
Change from medium size and hydrophobic (P) to medium size and polar (T)
The physico-chemical property of the reference and variant residues and the change implicated.
BLOSUM score:
-1
The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another: Lowest score: -4 (low probability of substitution).Highest score: 11 (high probability of substitution). More information can be found on the following page
Variant description:
In RMS; reduces insulin binding.
Any additional useful information about the variant.
Sequence information
Variant position:
997
The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length:
1382
The length of the canonical sequence.
Location on the sequence:
LFLRKRQPDGPLGPLYASSN
P EYLSASDVFPCSVYVPDEWE
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation:
The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human LFLRKR-QPDGPLGPLYASS--NP EYLSASDVFPCSVYVPDEWE
Mouse LFLRKR-QPDGPMGPLYASS--NP EYLSASDVFPSSVYVPD
Rat LFLRKR-QPDGPMGPLYASS--NP EYLSASDVFPSSVYVPD
Xenopus laevis CVVQKKKDAEGPAGPLYTSS--NP EYLSASE-----VYIPD
Caenorhabditis elegans YYIQVRYGKKVKALSDFMQL--NP EYCVDN------KYNAD
Drosophila CYLHKR---KVPSNDLHMNTEVNP FYASM-------QYIPD
Sequence annotation in neighborhood:
The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
Chain
763 – 1382
Insulin receptor subunit beta
Topological domain
980 – 1382
Cytoplasmic
Region
999 – 999
Important for interaction with IRS1, SHC1 and STAT5B
Modified residue
992 – 992
Phosphotyrosine; by autocatalysis
Modified residue
999 – 999
Phosphotyrosine; by autocatalysis
Modified residue
1011 – 1011
Phosphotyrosine; by autocatalysis
Mutagenesis
991 – 991
L -> A. Reduces interaction with IRS1 but has no effect on interaction with SHC1.
Mutagenesis
992 – 992
Y -> A. Reduces interaction with IRS1 but has no effect on interaction with SHC1.
Mutagenesis
996 – 997
NP -> AA. Abolishes interaction with IRS1. Severely disrupts, but does not abolish interaction with SHC1.
Mutagenesis
996 – 996
N -> A. Abolishes interaction with IRS1 and significantly reduces interaction with SHC1. Has no effect on interaction with PIK3R1.
Mutagenesis
997 – 997
P -> A. Abolishes interaction with IRS1 and significantly reduces interaction with SHC1. Has no effect on interaction with PIK3R1.
Mutagenesis
998 – 998
E -> A. Does not affect interaction with IRS1, SHC1 or PIK3R1.
Mutagenesis
999 – 999
Y -> E. Abolishes interaction with IRS1 and SHC1.
Mutagenesis
999 – 999
Y -> F. Has no effect on insulin-stimulated autophosphorylation, but inhibits the biological activity of the receptor. Abolishes interaction with IRS1 and almost completely prevents interaction with SHC1. Has no effect on interaction with PIK3R1. Abolishes interaction with STAT5B.
Mutagenesis
1000 – 1000
L -> AR. Severely reduces interaction with SHC1. Has no effect on interaction with IRS1.
Mutagenesis
1002 – 1002
A -> D. Reduces interaction with IRS1 but has no effect on interaction with SHC1.
Mutagenesis
1011 – 1011
Y -> A. Increases kinase activity.
Literature citations
Genotype-phenotype correlation in inherited severe insulin resistance.
Longo N.; Wang Y.; Smith S.A.; Langley S.D.; DiMeglio L.A.; Giannella-Neto D.;
Hum. Mol. Genet. 11:1465-1475(2002)
Cited for: CHARACTERIZATION OF VARIANTS LEPRCH PRO-113; VAL-119; ASN-308 DEL; THR-925 AND TRP-926; VARIANTS RMS THR-997; THR-1143; TRP-1158 AND TRP-1201;
Disclaimer:
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.