UniProtKB/SwissProt variant VAR

Variant information

Variant position:

822

The position of the amino-acid change on the UniProtKB canonical protein sequence.

Type of variant:

LB/B

The variants are classified into three categories: LP/P, LB/B and US.

LP/P: likely pathogenic or pathogenic.
LB/B: likely benign or benign.
US: uncertain significance

Residue change:

From Isoleucine (I) to Methionine (M) at position 822 (I822M, p.Ile822Met).

Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.

Physico-chemical properties:

Similar physico-chemical property. Both residues are medium size and hydrophobic.

The physico-chemical property of the reference and variant residues and the change implicated.

BLOSUM score:

1

The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another:

Lowest score: -4 (low probability of substitution).
Highest score: 11 (high probability of substitution).

More information can be found on the following page

Other resources:

Links to websites of interest for the variant.

Variant rs17567 [ dbSNP | Ensembl ]

Sequence information

Variant position:

822

The position of the amino-acid change on the UniProtKB canonical protein sequence.

Protein sequence length:

896

The length of the canonical sequence.

Location on the sequence:

LNDPFQPFPGNDSPKEKDPE I FCDPFTSATTTTNKEADPSN

The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.

Residue conservation:

The multiple alignment of the region surrounding the variant against various orthologous sequences.

Human                         LNDPFQPFPGNDSPKEKDPEI--------FCD-------------------------PFTSAT------TTTNKEADP--SN

Mouse                         LNDPFQPFPGNDSPKEKDPDM--------FCD---------

Slime mold                    SNDSFDDFQTTPTPTNNNNNTTTTEFGVKFSDTTFGDSSNG

Sequence annotation in neighborhood:

The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:

Type: the type of sequence feature.
Positions: endpoints of the sequence feature.
Description: contains additional information about the feature.

Type	Positions	Description
Chain	2 – 896	Epidermal growth factor receptor substrate 15
Region	599 – 827	15 X 3 AA repeats of D-P-F
Compositional bias	768 – 850	Pro-rich
Modified residue	814 – 814	Phosphoserine

Literature citations

The human eps15 gene, encoding a tyrosine kinase substrate, is conserved in evolution and maps to 1p31-p32.
Wong W.T.; Kraus M.H.; Carlomagno F.; Zelano A.; Druck T.; Croce C.M.; Huebner K.; di Fiore P.P.;
Oncogene 9:1591-1597(1994)
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1); VARIANT MET-822;

UniProtKB/Swiss-Prot variant pages

UniProtKB/Swiss-Prot P42566: Variant p.Ile822Met