Variant position: 480 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 919 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human LAALSQAVSLTPPGQEFPPA MVDAGKGKTAEARKTWLEEQG
Mouse LAALAQAVSLTPPGQEFPTV VVDAGKGKTAEARKMWLEEQG
Rat LAALAQAGSLTPPGQEFPTV VVDAGKGKTAEARKMWLEEQG
Xenopus laevis LSSIAQAVCLTPPGRDAPPT VMDAGKGMSADARKSWIEEKA
Caenorhabditis elegans LSALGHAFTLSK-------I TDQKVRGDKLDSLKDANVKR-
Drosophila LTALAIGLVKKN-------H IDDCKASKVPDVYKDEIVDTT
Slime mold LMALAKSVLVTPPIDGSGQQ IFDIRKQMKQEEFEERYQNVV
Baker's yeast LISLSKALLL---------H DENREDSPDKDVPMDVLESAQ
Fission yeast LVALANATAQY--------H ADKNGEKLSQQDRIEGEQ---
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
1 – 919 DNA ligase 1
NIEHS SNPs program;
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]; VARIANTS VAL-24; TRP-62; GLU-249; SER-267; MET-349; ILE-369; VAL-480; ILE-614 AND LEU-677;
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