Sequence information
Variant position: 378 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 422 The length of the canonical sequence.
Location on the sequence:
LPTSPSVNGRSYDTYTPPHM
Q THMNSQPMGTSGTTSTGLIS
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human LPTSP---------------------------------SVNGRSYDTYTP-----------------------------PHMQ THMNSQPMGTSGTTSTGL----------IS
Mouse LPTSP---------------------------------SVN
Rat LPTSP---------------------------------SVN
Bovine LPTSP---------------------------------SVN
Xenopus laevis LPTSP---------------------------------SVN
Zebrafish LPTSP---------------------------------SVN
Drosophila MTLRPPPMAPAHHHIVPGDGGRPAGVGLGSGQSANLGASCS
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
Chain
1 – 422
Paired box protein Pax-6
Region
345 – 422
Required for suppression of NFATC1-mediated transcription
Literature citations
Mutations of the PAX6 gene detected in patients with a variety of optic-nerve malformations.
Azuma N.; Yamaguchi Y.; Handa H.; Tadokoro K.; Asaka A.; Kawase E.; Yamada M.;
Am. J. Hum. Genet. 72:1565-1570(2003)
Cited for: INVOLVEMENT IN OPTIC-NERVE MALFORMATIONS; VARIANT MORNING GLORY DISK ANOMALY SER-68; VARIANT COLON SER-258; VARIANT COAD SER-258; VARIANT ASGD5 PRO-363; VARIANTS BONH ILE-292; ARG-378; VAL-381 AND ALA-391;
Disclaimer:
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.