Variant position: 5 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 147 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human MVHL TPEEKTAVNALWGKVNVDAVG
Gorilla MVHL TPEEKTAVNALWGKVNVDAVG
Chimpanzee MVHL TPEEKTAVNALWGKVNVDAVG
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
1 – 1 Removed
2 – 147 Hemoglobin subunit delta
2 – 2 N-acetylalanine; in variant Niigata
Heterogeneous patterns of sequence variation in the human beta-globin gene cluster.
Webster M.T.; Harding R.M.; Wells R.S.; Clegg J.B.;
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]; VARIANT SER-5;
An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.
Bian Y.; Song C.; Cheng K.; Dong M.; Wang F.; Huang J.; Sun D.; Wang L.; Ye M.; Zou H.;
J. Proteomics 96:253-262(2014)
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-51; IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS];
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