UniProtKB/Swiss-Prot P18054: Variant p.Asn322Ser

• Variant information
• Sequence information
• Literature citations
• All

Variant information

Variant position: 322 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Type of variant: LB/B The variants are classified into three categories: LP/P, LB/B and US.

• LP/P: likely pathogenic or pathogenic.
• LB/B: likely benign or benign.
• US: uncertain significance

Residue change: From Asparagine (N) to Serine (S) at position 322 (N322S, p.Asn322Ser). Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.
Physico-chemical properties: Change from medium size and polar (N) to small size and polar (S) The physico-chemical property of the reference and variant residues and the change implicated.
BLOSUM score: 1 The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another:

• Lowest score: -4 (low probability of substitution).
• Highest score: 11 (high probability of substitution).

More information can be found on the following page
Variant description: Does not affect lipoxygenase activity. Any additional useful information about the variant.
Other resources: Links to websites of interest for the variant.

• Variant rs434473 [ dbSNP | Ensembl ]

Sequence information

Variant position: 322 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 663 The length of the canonical sequence.
Location on the sequence: MLKMEPNGKLQPMVIQIQPP N PSSPTPTLFLPSDPPLAWLL The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:

• Type: the type of sequence feature.
• Positions: endpoints of the sequence feature.
• Description: contains additional information about the feature.

Type	Positions	Description
Chain	1 – 663	Polyunsaturated fatty acid lipoxygenase ALOX12
Domain	115 – 663	Lipoxygenase

Literature citations

Molecular cloning and expression of human arachidonate 12-lipoxygenase.
Yoshimoto T.; Yamamoto Y.; Arakawa T.; Suzuki H.; Yamamoto S.; Yokoyama C.; Tanabe T.; Toh H.;
Biochem. Biophys. Res. Commun. 172:1230-1235(1990)
Cited for: NUCLEOTIDE SEQUENCE [MRNA]; VARIANT SER-322; Molecular cloning, primary structure, and expression of the human platelet/erythroleukemia cell 12-lipoxygenase.
Funk C.D.; Furci L.; Fitzgerald G.A.;
Proc. Natl. Acad. Sci. U.S.A. 87:5638-5642(1990)
Cited for: NUCLEOTIDE SEQUENCE [MRNA]; VARIANT SER-322; Submission
SeattleSNPs variation discovery resource;
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]; VARIANTS ARG-261; SER-322 AND HIS-430; Functional characterization of genetic enzyme variations in human lipoxygenases.
Horn T.; Reddy Kakularam K.; Anton M.; Richter C.; Reddanna P.; Kuhn H.;
Redox Biol. 1:566-577(2013)
Cited for: CATALYTIC ACTIVITY; FUNCTION; VARIANTS HIS-134; LYS-259; ARG-261 AND SER-322; CHARACTERIZATION OF VARIANTS HIS-134; LYS-259; ARG-261 AND SER-322;