Variant position: 115 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 455 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human HLRHCLSCSKCRKEMGQVEI SSCTVDRDTVCGCRKNQYRHY
Mouse YLRQCLSCKTCRKEMSQVEI SPCQADKDTVCGCKENQFQRY
Rat HVRQCLSCKTCRKEMFQVEI SPCKADMDTVCGCKKNQFQRY
Pig HLTQCLSCSKCRSEMSQVEI SPCTVDRDTVCGCRKNQYRKY
Bovine HLRRCLSCSRCRDEMFQVEI SPCVVDRDTVCGCRKNQYREY
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
30 – 455 Tumor necrosis factor receptor superfamily member 1A, membrane form
41 – 201 Tumor necrosis factor-binding protein 1
30 – 211 Extracellular
83 – 125 TNFR-Cys 2
102 – 117
105 – 125
1 – 232 Missing. In isoform 3.
112 – 115
The tumor-necrosis-factor receptor-associated periodic syndrome: new mutations in TNFRSF1A, ancestral origins, genotype-phenotype studies, and evidence for further genetic heterogeneity of periodic fevers.
Aksentijevich I.; Galon J.; Soares M.; Mansfield E.; Hull K.; Oh H.-H.; Goldbach-Mansky R.; Dean J.; Athreya B.; Reginato A.J.; Henrickson M.; Pons-Estel B.; O'Shea J.J.; Kastner D.L.;
Am. J. Hum. Genet. 69:301-314(2001)
Cited for: VARIANTS FHF GLN-51; SER-59; GLY-62; LEU-75; GLY-115 AND GLN-121;
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