UniProtKB/Swiss-Prot P10636 : Variant p.Ser637Phe
Microtubule-associated protein tau
Gene: MAPT
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Variant information
Variant position:
637
The position of the amino-acid change on the UniProtKB canonical protein sequence.
Type of variant:
LP/P [Disclaimer : Variants classification is intended for research purposes only, not for clinical and diagnostic use . The label disease variant is assigned according to literature reports on probable disease-association that can be based on theoretical reasons. This label must not be considered as a definitive proof for the pathogenic role of a variant. ]
The variants are classified into three categories: LP/P, LB/B and US.LP/P: likely pathogenic or pathogenic. LB/B: likely benign or benign. US: uncertain significance
Residue change:
From Serine (S) to Phenylalanine (F) at position 637 (S637F, p.Ser637Phe).
Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.
Physico-chemical properties:
Change from small size and polar (S) to large size and aromatic (F)
The physico-chemical property of the reference and variant residues and the change implicated.
BLOSUM score:
-2
The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another: Lowest score: -4 (low probability of substitution).Highest score: 11 (high probability of substitution). More information can be found on the following page
Variant description:
In PIDB; markedly reduced ability of tau to promote microtubule assembly.
Any additional useful information about the variant.
Other resources:
Links to websites of interest for the variant.
Sequence information
Variant position:
637
The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length:
758
The length of the canonical sequence.
Location on the sequence:
VPGGGSVQIVYKPVDLSKVT
S KCGSLGNIHHKPGGGQVEVK
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation:
The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human VPGGGSVQIVYKPVDLSKVTS KCGSLGNIHHKPGGGQVEVK
Gorilla VPGGGSVQIVYKPVDLSKVTS KCGSLGNIHHKPGGGQVEVK
Rhesus macaque VPGGGSVQIVYKPVDLSKVTS KCGSLGNIHHKPGGGQVEVK
Chimpanzee VPGGGSVQIVYKPVDLSKVTS KCGSLGNIHHKPGGGQVEVK
Mouse VPGGGSVQIVYKPVDLSKVTS KCGSLGNIHHKPGGGQVEVK
Rat VPGGGSVHIVYKPVDLSKVTS KCGSLGNIHHKPGGGQVEVK
Bovine VPGGGSVQIVYKPVDLSKVTS KCGSLGNIHHKPGGGQVEVK
Goat VPGGGSVQIVYKPVDLSKVTS KCGSLGNIHHKPGGGQVEVK
Sequence annotation in neighborhood:
The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
Chain
2 – 758
Microtubule-associated protein tau
Repeat
623 – 653
Tau/MAP 3
Region
561 – 685
Microtubule-binding domain
Site
628 – 628
Not glycated
Site
634 – 634
Not glycated
Site
638 – 638
Not glycated
Site
648 – 648
Not glycated
Site
657 – 657
Not glycated
Modified residue
622 – 622
Phosphoserine; by PHK
Modified residue
628 – 628
N6,N6-dimethyllysine; alternate
Modified residue
628 – 628
N6-acetyllysine; alternate
Modified residue
634 – 634
N6-acetyllysine; alternate
Modified residue
638 – 638
N6-acetyllysine; alternate
Modified residue
641 – 641
Phosphoserine
Modified residue
648 – 648
N6-acetyllysine; alternate
Disulfide bond
608 – 639
Cross
628 – 628
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); in PHF-tau
Cross
634 – 634
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate
Cross
638 – 638
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate
Cross
648 – 648
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate
Beta strand
634 – 643
Literature citations
A novel tau mutation, S320F, causes a tauopathy with inclusions similar to those in Pick's disease.
Rosso S.M.; Van Herpen E.; Deelen W.; Kamphorst W.; Severijnen L.-A.; Willemsen R.; Ravid R.; Niermeijer M.F.; Dooijes D.; Smith M.J.; Goedert M.; Heutink P.; Van Swieten J.C.;
Ann. Neurol. 51:373-376(2002)
Cited for: VARIANT PIDB PHE-637; CHARACTERIZATION OF VARIANT PIDB PHE-637;
Disclaimer:
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.