Sequence information
Variant position: 239 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 707 The length of the canonical sequence.
Location on the sequence:
PTRFGNADGAACHFPFIFEG
R SYSACTTDGRSDGLPWCSTT
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human PTRFGNADGAACHFPFIFEGR SYSACTTDGRSDGLPWCSTT
PTHFGNADGAPCHFPFTFEGR SYSACTTDGRSDDTPWCSTT
Mouse PTYYGNSNGAPCHFPFTFEGR SYSACTTDGRNDGTPWCSTT
Rat PTYFGNANGAPCHFPFTFEGR SYLSCTTDGRNDGKPWCGTT
Bovine PTYFGNAKGAACHFPFTFEGR SYSACTTDGRSDDMLWCSTT
Rabbit PTYFGNADGAPCHFPFTFEGR SYTACTTDGRSDGMAWCSTT
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
Chain
107 – 707
82 kDa matrix metalloproteinase-9
Domain
225 – 273
Fibronectin type-II 1
Disulfide bond
230 – 256
Literature citations
Submission
NIEHS SNPs program;
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]; VARIANTS VAL-20; HIS-239; VAL-571; PRO-574 AND GLN-668;
Disclaimer:
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.