Variant position: 188 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 379 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human CSAAHSRQALSCKMAVEYDR FIESGRKWFCHVDDDNYVNLR
Mouse CSSAHSRQALSCKMAVEYDR FIESGKKWFCHVDDDNYVNLR
Rat CSAAHSRQALSCKMAVEYDR FIESGKKWFCHVDDDNYVNLR
Bovine CSAAHSRQALSCKMAVEYDR FIESGRKWFCHVDDDNYVNVR
Chicken CSAAHSRQALSCKMAVEYDK FIESGRKWFCHVDDDNYVNVR
Xenopus laevis CSAAHSRQALSCKMAVEYDK FIESDKKWFCHVDDDNYVNVR
Zebrafish CSAAHSRQALSCKMAVEYDK FIESGKKWFCHVDDDNYVNTK
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
1 – 379 Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
30 – 379 Lumenal
202 – 202 Manganese
201 – 201 Substrate
Mutation of the LUNATIC FRINGE gene in humans causes spondylocostal dysostosis with a severe vertebral phenotype.
Sparrow D.B.; Chapman G.; Wouters M.A.; Whittock N.V.; Ellard S.; Fatkin D.; Turnpenny P.D.; Kusumi K.; Sillence D.; Dunwoodie S.L.;
Am. J. Hum. Genet. 78:28-37(2006)
Cited for: VARIANT SCDO3 LEU-188; CHARACTERIZATION OF VARIANT SCDO3 LEU-188;
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.