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UniProtKB/Swiss-Prot variant pages

UniProtKB/Swiss-Prot P51168: Variant p.Tyr620His

Epithelial sodium channel subunit beta
Gene: SCNN1B
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Variant information Variant position: help 620 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Type of variant: help LP/P [Disclaimer] The variants are classified into three categories: LP/P, LB/B and US.
  • LP/P: likely pathogenic or pathogenic.
  • LB/B: likely benign or benign.
  • US: uncertain significance
Residue change: help From Tyrosine (Y) to Histidine (H) at position 620 (Y620H, p.Tyr620His). Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.
Physico-chemical properties: help Change from large size and aromatic (Y) to medium size and polar (H) The physico-chemical property of the reference and variant residues and the change implicated.
BLOSUM score: help 2 The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another:
  • Lowest score: -4 (low probability of substitution).
  • Highest score: 11 (high probability of substitution).
More information can be found on the following page
Variant description: help In LIDLS1; constitutive channel activation. Any additional useful information about the variant.
Other resources: help Links to websites of interest for the variant.


Sequence information Variant position: help 620 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: help 640 The length of the canonical sequence.
Location on the sequence: help NTGPYPSEQALPIPGTPPPN Y DSLRLQPLDVIESDSEGDAI The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: help The multiple alignment of the region surrounding the variant against various orthologous sequences. 
Human                         NTGPYPSEQALPIPGTPPPNYDSLRLQPLDVIESDSEGDAI

                              DPGTYPDEQTLPIPGTPPPNYDSLRLQPLDVIESDSEGDAI

Chimpanzee                    NTGPYPNEQALPIPGTPPPNYDSLRLQPLDVIESDSEGDAI

Mouse                         HGEVYPDQQTLPIPGTPPPNYDSLRLQPLDTMESDSEVEAI

Rat                           NAEVYPDQQTLPIPGTPPPNYDSLRLQPLDTMESDSEVEAI

Bovine                        DVEAYPHEQNPPIPGTPPPNYDSLRLQPLDVIESDSEGDAI

Rabbit                        DAEAYPDEQALPIPGTPPPNYDSLRLQPLDVVESDSEGDAV

Sheep                         DAGAYRREQNPPIPGTPPPNYDSLRLQPLDVIESDSEGDAI

Xenopus laevis                ----------VDIPGTPPPNYDSLRVNTAEPVSSDEEN---
Sequence annotation in neighborhood: help The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
  • Type: the type of sequence feature.
  • Positions: endpoints of the sequence feature.
  • Description: contains additional information about the feature.
TypePositionsDescription
Chain 1 – 640 Epithelial sodium channel subunit beta
Topological domain 554 – 640 Cytoplasmic
Region 590 – 640 Disordered
Motif 616 – 620 PY motif; recruits WW domain-containing proteins and is thereby required for ubiquitination and inhibition of the channel by NEDD4 and NEDD4L
Modified residue 633 – 633 Phosphoserine
Modified residue 635 – 635 Phosphoserine
Mutagenesis 620 – 620 Y -> A. Loss of inhibition of the ENaC channel by NEDD4. Loss of ubiquitination by NEDD4L.



Literature citations
Liddle disease caused by a missense mutation of beta subunit of the epithelial sodium channel gene.
Tamura H.; Schild L.; Enomoto N.; Matsui N.; Marumo F.; Rossier B.C.;
J. Clin. Invest. 97:1780-1784(1996)
Cited for: VARIANT LIDLS1 HIS-620; CHARACTERIZATION OF VARIANT LIDLS1 HIS-620;
Disclaimer: Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.