Variant position: 499 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 616 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human RVLVMGATNRPQELDEAVLR RFIKRVYVSLPNEETRLLLLK
Mouse RVLVMGATNRPQELDEAVLR RFIKRVYVSLPNEETRLLLLK
Rat RVLVMGATNRPQELDEAVLR RFIKRVYVSLPNEETRLLLLK
Pig RVLVMGATNRPQELDEAVLR RFIKRVYVSLPNEETRLLLLK
Bovine RVLVMGATNRPQELDEAVLR RFTKRVYVSLPNEETRLLLLK
Chicken RILVMGATNRPQELDDAVLR RFTKRVYVSLPNEETRLILLK
Xenopus laevis RVLVMGATNRPQELDDAVLR RFTKRVYVALPNEETRLVLLK
Xenopus tropicalis RVLVMGATNRPQELDDAVLR RFTKRVYVSLPNEETRLLLLK
Zebrafish RVLVMGATNRPQELDEAVLR RFAKRIYVALPTEETRLKLLK
Caenorhabditis elegans RILVIGATNRPHELDDAVLR RFPKRIMLNLPDEEARKELIT
Drosophila RIVVLAATNRPQELDEAALR RFTKRVYVSLPDEQTRELLLN
Slime mold RVLVMGATNRPEDLDDAALR RLVKRIYVGLPELETRLQIIQ
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Eight novel mutations in SPG4 in a large sample of patients with hereditary spastic paraplegia.
Crippa F.; Panzeri C.; Martinuzzi A.; Arnoldi A.; Redaelli F.; Tonelli A.; Baschirotto C.; Vazza G.; Mostacciuolo M.L.; Daga A.; Orso G.; Profice P.; Trabacca A.; D'Angelo M.G.; Comi G.P.; Galbiati S.; Lamperti C.; Bonato S.; Pandolfo M.; Meola G.; Musumeci O.; Toscano A.; Trevisan C.P.; Bresolin N.; Bassi M.T.;
Arch. Neurol. 63:750-755(2006)
Cited for: VARIANTS SPG4 VAL-195; VAL-406; GLY-493; HIS-499; TRP-503 AND CYS-607;
Mutation analysis of SPAST, ATL1, and REEP1 in Korean Patients with Hereditary Spastic Paraplegia.
Kim T.H.; Lee J.H.; Park Y.E.; Shin J.H.; Nam T.S.; Kim H.S.; Jang H.J.; Semenov A.; Kim S.J.; Kim D.S.;
J. Clin. Neurol. 10:257-261(2014)
Cited for: VARIANTS SPG4 44-SER--VAL-616 DEL; 245-SER--VAL-616 DEL; 254-LYS--VAL-616 DEL; GLY-372; LEU-399; ARG-451 DEL; ARG-458; HIS-499 AND 581-ARG--VAL-616 DEL;
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.