Variant position: 543 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 590 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human GLAGGSSG------------SYYSSSSGGVGL GGGLSVGGSGFSASSGRGLGV
Chimpanzee SLAGGGSG------------SYYSSSSGGVGL GGGLSVGGS
Mouse GL-----G------------PRFTRGGGGLGL GSGLSVGGS
Rat DI-----G------------PLLNRR----GL GSGLSVGGS
Bovine GLGGGLGGGLGSGLGGGGSSSFYSSSSGGVGL GGGLSVGGS
Xenopus laevis -------------------------------- ---------
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
1 – 590 Keratin, type II cytoskeletal 5
478 – 590 Tail
528 – 590 Ser-rich
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
The MGC Project Team;
Genome Res. 14:2121-2127(2004)
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]; VARIANTS GLY-528 AND SER-543;
Isolation and characterization of a cDNA clone coding for human epidermal keratin K5. Sequence of the carboxyterminal half of this keratin.
Galup C.; Darmon M.Y.;
J. Invest. Dermatol. 91:39-42(1988)
Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 348-590; VARIANT SER-543;
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