Variant position: 790 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 2009 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human VDLAITICIVLNTLFMAMEH YPMTDHFNNVLTVGNLVFTGI
Mouse VDLAITICIVLNTLFMAMEH YPMTEHFNHVLTVGNLVFTGI
Rat VDLAITICIVLNTLFMAMEH YPMTEHFNHVLTVGNLVFTGI
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
1 – 2009 Sodium channel protein type 1 subunit alpha
788 – 798 Extracellular
750 – 1022 II
Two novel SCN1A missense mutations in generalized epilepsy with febrile seizures plus.
Annesi G.; Gambardella A.; Carrideo S.; Incorpora G.; Labate A.; Pasqua A.A.; Civitelli D.; Polizzi A.; Annesi F.; Spadafora P.; Tarantino P.; Ciro Candiano I.C.; Romeo N.; De Marco E.V.; Ventura P.; LePiane E.; Zappia M.; Aguglia U.; Pavone L.; Quattrone A.;
Cited for: VARIANTS GEFS+2 CYS-790 AND THR-1852;
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