Variant position: 615 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 1093 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human VNVLPSFTKTPHDITIRTTT MARLECAATGHPNPQIAWQKD
Mouse VNVLPSFTKIPHDIAIRTGT TARLECAATGHPNPQIAWQKD
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
35 – 1093 Leucine-rich repeats and immunoglobulin-like domains protein 1
35 – 794 Extracellular
599 – 688 Ig-like C2-type 2
Cloning, characterization, and expression of human LIG1.
Nilsson J.; Vallbo C.; Guo D.; Golovleva I.; Hallberg B.; Henriksson R.; Hedman H.;
Biochem. Biophys. Res. Commun. 284:1155-1161(2001)
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1); TISSUE SPECIFICITY; VARIANT VAL-615;
The full-ORF clone resource of the German cDNA consortium.
Bechtel S.; Rosenfelder H.; Duda A.; Schmidt C.P.; Ernst U.; Wellenreuther R.; Mehrle A.; Schuster C.; Bahr A.; Bloecker H.; Heubner D.; Hoerlein A.; Michel G.; Wedler H.; Koehrer K.; Ottenwaelder B.; Poustka A.; Wiemann S.; Schupp I.;
BMC Genomics 8:399-399(2007)
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 611-1093; VARIANT VAL-615;
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.