Sequence information
Variant position: 1055 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 1220 The length of the canonical sequence.
Location on the sequence:
MLQQQPSAPVPLSSQSSFPQ
P HLPGGQPFHGVQQPLGQTGM
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human MLQQQPSAPVPLSSQSSFPQP HLPGGQ-----PFHGVQQPLGQTGM
Mouse GLQQQPSTPGPLSSHASFPQQ HLAGGQ-----PFHGVQQPL
Rat GLQQQPSASGPRSSHASFPQP HLAGGQ-----PFHGIQQPL
Chicken -MQQPPAAPV---GTPSFQPQ QLSTGQQAPLGPY--APQAL
Zebrafish TLQPQQQVPDQSAGPATFTPI Q---------------QQPL
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
Chain
1 – 1220
Protein transport protein Sec31A
Region
800 – 1113
Interaction with PDCD6
Compositional bias
800 – 1091
Pro-rich
Alternative sequence
510 – 1220
Missing. In isoform 5.
Literature citations
No reference for the current variant in UniProtKB/Swiss-Prot.
Disclaimer:
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.