Sequence information
Variant position: 153 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 916 The length of the canonical sequence.
Location on the sequence:
VYRAHRIIESCQEAFILRLF
R QKNKRGFIKAFTDNAVAFDT
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human VYRAHRIIESCQEAFILRLFR QKNKRGFIKAFTDNAVAFDT
Mouse VYRAHRIIESCQEAFILRLFR QKNKRGFIKAFTDNAVAFDT
Drosophila VLRAHTIIESCQEAFALRLFR QKNKTGFVKAFSSSPEAFTI
Slime mold IQNAHRITDTSIEYLLIKLFR QNNKKGFIKAFTTEPSLLVD
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
Chain
1 – 916
DNA repair endonuclease XPF
Region
1 – 457
Helicase-like
Literature citations
A new progeroid syndrome reveals that genotoxic stress suppresses the somatotroph axis.
Niedernhofer L.J.; Garinis G.A.; Raams A.; Lalai A.S.; Robinson A.R.; Appeldoorn E.; Odijk H.; Oostendorp R.; Ahmad A.; van Leeuwen W.; Theil A.F.; Vermeulen W.; van der Horst G.T.J.; Meinecke P.; Kleijer W.J.; Vijg J.; Jaspers N.G.J.; Hoeijmakers J.H.J.;
Nature 444:1038-1043(2006)
Cited for: VARIANT XFEPS PRO-153;
Disclaimer:
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.