Variant position: 273 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 1141 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human LVLTTLKTDGSPVMAAVQNP A-LTALTTPIQTAALQVPTLVG
Mouse LVLTTLKTDGSPVMAAVQNP A-LTALTAPIQTAALQVPTLV
Rat LVLTTLKTDGSPVMAAVQNP A-LTALTAPIQTAALQVPTLV
Xenopus laevis LVLTAVKADGSPVMTAVQNP A-ITTLAGTLQTTALQVPTLM
Zebrafish LLLTT-KPDGTQVLSTVQSP TGITTLTTPIQTTALQMPTLM
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
1 – 1141 Sterol regulatory element-binding protein 2
1 – 484 Processed sterol regulatory element-binding protein 2
1 – 479 Cytoplasmic
237 – 491 Interaction with LMNA
273 – 275 Missing. In isoform 2.
The consensus coding sequences of human breast and colorectal cancers.
Sjoeblom T.; Jones S.; Wood L.D.; Parsons D.W.; Lin J.; Barber T.D.; Mandelker D.; Leary R.J.; Ptak J.; Silliman N.; Szabo S.; Buckhaults P.; Farrell C.; Meeh P.; Markowitz S.D.; Willis J.; Dawson D.; Willson J.K.V.; Gazdar A.F.; Hartigan J.; Wu L.; Liu C.; Parmigiani G.; Park B.H.; Bachman K.E.; Papadopoulos N.; Vogelstein B.; Kinzler K.W.; Velculescu V.E.;
Cited for: VARIANTS [LARGE SCALE ANALYSIS] SER-273 AND LYS-347;
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