UniProtKB/Swiss-Prot Q96KG7: Variant p.Val206Ile

Multiple epidermal growth factor-like domains protein 10
Gene: MEGF10
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Variant information Variant position:

206 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Type of variant:

LB/B The variants are classified into three categories: LP/P, LB/B and US.

LP/P: likely pathogenic or pathogenic.
LB/B: likely benign or benign.
US: uncertain significance

Residue change:

From Valine (V) to Isoleucine (I) at position 206 (V206I, p.Val206Ile). Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.
Physico-chemical properties:

Similar physico-chemical property. Both residues are medium size and hydrophobic. The physico-chemical property of the reference and variant residues and the change implicated.
BLOSUM score:

3 The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another:

Lowest score: -4 (low probability of substitution).
Highest score: 11 (high probability of substitution).

More information can be found on the following page
Other resources:

Links to websites of interest for the variant.

Variant rs3812054 [ dbSNP | Ensembl ]

Sequence information Variant position:

206 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length:

1140 The length of the canonical sequence.
Location on the sequence:

TYGNDCHQRCQCQNGATCDH V TGECRCPPGYTGAFCEDLCP The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation:

The multiple alignment of the region surrounding the variant against various orthologous sequences.

Human                         TYGNDCHQRCQCQNGATCDHVTGECRCPPGYTGAFCEDLCP

Mouse                         TYGNDCHQRCQCQNGATCDHITGECRCSPGYTGAFCEDLCP

Xenopus tropicalis            TYGNDCQQKCQCQNGASCDHVTGECRCPPGYTGAFCEDLCP

Zebrafish                     TYGNNCQQKCLCQNNATCHHITGECVCSPGYTGAFCEDLCP

Sequence annotation in neighborhood:

The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:

Type: the type of sequence feature.
Positions: endpoints of the sequence feature.
Description: contains additional information about the feature.

Type	Positions	Description
Chain	26 – 1140	Multiple epidermal growth factor-like domains protein 10
Topological domain	26 – 857	Extracellular
Domain	187 – 222	EGF-like 3
Region	1 – 857	Necessary for interaction with AP2M1, self-assembly and formation of the irregular, mosaic-like adhesion pattern
Disulfide bond	197 – 210

Literature citations
No reference for the current variant in UniProtKB/Swiss-Prot.

Disclaimer: Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.