Variant position: 114 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 147 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human DTKSYWKALGISPFHEHAEV VFTANDSGPRRYTIAALLSPY
Chimpanzee DTKSYWKALGISPFHEHAEV VFTANDSGPRRYTIAALLSPY
Mouse DTKSYWKTLGISPFHEFADV VFTANDSGHRHYTIAALLSPY
Rat DTKSYWKALGISPFHEYAEV VFTANDSGHRHYTIAALLSPY
Pig DTKSYWKALGISPFHEYAEV VFTANDSGRRHYTIAALLSPY
Bovine DTKSYWKSLGISPFHEFAEV VFTANDSGPRHYTIAALLSPY
Rabbit DTKSYWKALGISPFHEYAEV VFTANDSGHRSYTIAALLSPF
Sheep DTKSYWKSLGISPFHEYAEV VFTANDSGLRHYTIAALLSPY
Chicken DTSSYWKGLGLSPFHEYADV VFTANDSGHRHYTIAALLSPF
Xenopus laevis ATKAFWGKLGLSPFHEYVDV VFTANDAGHRHYTIAVLLTPY
Xenopus tropicalis ATKTFWRKLGLSPFHEYVDV VFSANDAGHRHYTIAVLLTPY
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
21 – 147 Transthyretin
118 – 118 N-linked (GlcNAc...) asparagine
107 – 107 F -> M. Loss of tetramerization; when associated with M-130.
130 – 130 L -> M. Loss of tetramerization; when associated with M-107.
107 – 118
Identification of transthyretin variants by sequential proteomic and genomic analysis.
Bergen H.R. III; Zeldenrust S.R.; Butz M.L.; Snow D.S.; Dyck P.J.; Dyck P.J.B.; Klein C.J.; O'Brien J.F.; Thibodeau S.N.; Muddiman D.C.;
Clin. Chem. 50:1544-1552(2004)
Cited for: VARIANTS SER-26; CYS-53 AND ALA-114; VARIANTS AMYL-TTR GLU-67; HIS-78; ALA-80 AND TYR-97; IDENTIFICATION BY MASS SPECTROMETRY;
Genetic microheterogeneity of human transthyretin detected by IEF.
Altland K.; Benson M.D.; Costello C.E.; Ferlini A.; Hazenberg B.P.C.; Hund E.; Kristen A.V.; Linke R.P.; Merlini G.; Salvi F.; Saraiva M.J.; Singer R.; Skinner M.; Winter P.;
Cited for: VARIANTS AMYL-TTR PRO-32; ILE-40; SER-44; ALA-50; MET-50; LEU-53; VAL-53; PRO-56; THR-65; ALA-67; ALA-69; ILE-69; ALA-80; LEU-84; LEU-88; ALA-91; TYR-97; PHE-98; SER-104; ASN-104; THR-104; ALA-114; GLY-117; ASN-126; MET-127; VAL-127; MET-131 AND ILE-142; VARIANTS ILE-33; SER-121 AND THR-129; VARIANT CHICAGO MET-139;
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.