Variant position: 13 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 934 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human MAVQPKETLQLE SAAEVGFVRFFQGM--PEKPTTT
Mouse MAVQPKETLQLE GAAEAGFVRFFEGM--PEKPS
Rat MAVQPKETLQLE GAAEVGFVRFFEGM--PEKPS
Bovine MAVQPKDTLQLD SAAEVGFVRFFQGM--PEKPT
Drosophila TDSRQEPTLNMD TNARRNFIKFHAKL--GEKPA
Slime mold SDNEQEESSQVV LKEDKTFVTFFQSLVSSNEDT
Baker's yeast MSSTRPELKFSD VSEERNFYKKYTGL--PKKPL
Fission yeast -MSSRNASIANE RTDEARMFNFYEKM---PKDT
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
1 – 1 Removed
2 – 934 DNA mismatch repair protein Msh2
2 – 2 N-acetylalanine
1 – 66 Missing. In isoform 2.
Microsatellite instability and mutation analysis among southern Italian patients with colorectal carcinoma: detection of different alterations accounting for MLH1 and MSH2 inactivation in familial cases.
Colombino M.; Cossu A.; Arba A.; Manca A.; Curci A.; Avallone A.; Comella G.; Botti G.; Scintu F.; Amoruso M.; D'Abbicco D.; d'Agnessa M.R.; Spanu A.; Tanda F.; Palmieri G.;
Ann. Oncol. 14:1530-1536(2003)
Cited for: VARIANTS CRC ILE-13 AND ILE-342; VARIANT ASP-322;
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