Variant position: 335 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 934 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human GSVEDTTGSQSLAALLNKCK TPQGQRLVNQWIKQPLMDKNR
Mouse GSVEDTTGSQSLAALLNKCK TAQGQRLVNQWIKQPLMDRNR
Rat GSVEDTTGSQSLAAFLNKCK TAQGQRLVSQWIKQPLMDKNR
Bovine GSVEDTSGSQSLAALLNKCK TPQGQRLVNQWIKQPLMDKNR
Drosophila HPSMPSYRWQSVLGVLDHCR TPQGHRLMGQWVKQPLRSRNI
Slime mold GASSSSNKDQSLYNLLNQCN TPMGSRLLLQWVKQPLLNAEE
Baker's yeast TSAGNSGKVTSLFQLLNHCK TNAGVRLLNEWLKQPLTNIDE
Fission yeast PPNGNAHKTMSLYGLLNHCR TAMGARNLRRWIVQPLLDAKS
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
2 – 934 DNA mismatch repair protein Msh2
hMLH1 and hMSH2 mutations in families with familial clustering of gastric cancer and hereditary non-polyposis colorectal cancer.
Kim J.C.; Kim H.C.; Roh S.A.; Koo K.H.; Lee D.H.; Yu C.S.; Lee J.H.; Kim T.W.; Lee H.I.; Beck N.E.; Bodmer W.F.;
Cancer Detect. Prev. 25:503-510(2001)
Cited for: VARIANTS GASTRIC CANCER PHE-17; GLU-824; ALA-868; GLY-870 AND GLY-873; VARIANTS HNPCC1 CYS-98; TYR-323; ILE-335; ARG-629 AND VAL-714;
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.