Variant position: 564 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 934 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human IQKNGVKFTNSKLTSLNEEY TKNKTEYEEAQDAIVKEIVNI
Mouse IQKNGVKFTNSELSSLNEEY TKNKGEYEEAQDAIVKEIVNI
Rat IQKNGVKFTNSELSSLNEEY TKNKGEYEEAQDAIVKEIVNI
Bovine IQKNGVKFTNSKLTSLNEEY TKNKTEYEEAQNAIVKEIVNI
Drosophila VIKGGVRFTSDKLEGYADEF ASCRTRYEEQQLSIVEEIIHV
Slime mold TAKDGVRFATREIDTLNEAY KKWSAEYLDKQDGLAKRTLQI
Baker's yeast TVKAGIFFSTKQLKSIANET NILQKEYDKQQSALVREIINI
Fission yeast TQKNGVYFTTKRLHSLNNSY MDHQKSYRYHQNGLAREVIKI
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
2 – 934 DNA mismatch repair protein Msh2
555 – 555 N6-acetyllysine
567 – 567 N6-acetyllysine
564 – 567
Impact of microsatellite testing and mismatch repair protein expression on the clinical interpretation of genetic testing in hereditary non-polyposis colorectal cancer.
Ward R.; Meldrum C.; Williams R.; Mokany E.; Scott R.; Turner J.; Hawkins N.; Burgess B.; Groombridge C.; Spigelman A.;
J. Cancer Res. Clin. Oncol. 128:403-411(2002)
Cited for: VARIANTS HNPCC1 ILE-102; ASP-163 AND ALA-564; VARIANT ASP-322;
Clinical and molecular characteristics of hereditary non-polyposis colorectal cancer families in Southeast Asia.
Lee S.-C.; Guo J.-Y.; Lim R.; Soo R.; Koay E.; Salto-Tellez M.; Leong A.; Goh B.-C.;
Clin. Genet. 68:137-145(2005)
Cited for: VARIANTS HNPCC1 VAL-169; PHE-390; ALA-564 AND ARG-629; VARIANT CRC LYS-419;
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.