Variant position: 1278 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 1331 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human NRNSAIIGGVIAVVIFTILC TLVFLIRYMFRHKGTYHTNEA
Mouse NRNSAIIGGVIAVVIFTILC TLVFLIRYMFRHKGTYHTNEA
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
28 – 1331 Contactin-associated protein-like 2
1263 – 1283 Helical
Molecular cytogenetic analysis and resequencing of contactin associated protein-like 2 in autism spectrum disorders.
Bakkaloglu B.; O'Roak B.J.; Louvi A.; Gupta A.R.; Abelson J.F.; Morgan T.M.; Chawarska K.; Klin A.; Ercan-Sencicek A.G.; Stillman A.A.; Tanriover G.; Abrahams B.S.; Duvall J.A.; Robbins E.M.; Geschwind D.H.; Biederer T.; Gunel M.; Lifton R.P.; State M.W.;
Am. J. Hum. Genet. 82:165-173(2008)
Cited for: INVOLVEMENT IN AUTS15; VARIANTS GLN-114; MET-218; MET-226; CYS-283; ASN-382; SER-407; ASP-418; LYS-680; GLN-699; CYS-716; SER-731; ASP-779; THR-869; HIS-906; ASN-1038; ALA-1102; GLY-1114; HIS-1119; HIS-1129; THR-1227; THR-1253 AND ILE-1278; CHROMOSOMAL REARRANGEMENT;
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.