Variant position: 146 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 854 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human PIKIIAVHPHFVRS-SCKQFV TGGK--KLLLFERSWMNRWKSAV
Mouse PIKIIAVHPQFVRS-SCKQFV TGGK--KLLLFERTWMNRWK
Caenorhabditis elegans MPKSIYFSPDFIRQQSGHCFI MGER--NLVLYEKR-MFQYK
Baker's yeast PINSVALHSNFQ---ASRMFV SGGMAGDVVLSQRNWLGNRI
Fission yeast PLLSVAIDPYYSTR-SSRQVL SGGRAGKVVLSEKGWLGN-K
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
1 – 854 Vacuolar protein sorting-associated protein 41 homolog
1 – 540 Interaction with ARL8B
The small GTPase Arl8b regulates assembly of the mammalian HOPS complex on lysosomes.
Khatter D.; Raina V.B.; Dwivedi D.; Sindhwani A.; Bahl S.; Sharma M.;
J. Cell Sci. 128:1746-1761(2015)
Cited for: FUNCTION; SUBUNIT; INTERACTION WITH ARL8B; VARIANT PRO-146; CHARACTERIZATION OF VARIANT PRO-146;
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.