Sequence information
Variant position: 400 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 1477 The length of the canonical sequence.
Location on the sequence:
SGIGHAMVTISVDGILTTTG
Y TQEDYTMLGSDDFFYVGGSP
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human SGIGHAMV-------TISVDGILTTTGY TQEDYTMLGSDDFFYVGGSP
Mouse SGIGHAMVNKLHCSVTISVDGILTTTGY TQEDYTMLGSDDF
Rat SGIGHAMVNKLHCSVTISVDGILTTTGY TQEDYTMLGSDDF
Bovine SGIGHAMVNKLHCSVTISVDGILTTTGY TQEDYTMLGSDDF
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
Chain
31 – 1477
Neurexin-1
Topological domain
31 – 1401
Extracellular
Domain
283 – 473
Laminin G-like 2
Metal binding
407 – 407
Calcium 1; via carbonyl oxygen
Alternative sequence
1 – 1335
Missing. In isoform 4.
Alternative sequence
386 – 386
M -> MVNKLHCS. In isoform 3a.
Literature citations
No reference for the current variant in UniProtKB/Swiss-Prot.
Disclaimer:
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.