Variant position: 554 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 904 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human ILDLQHNNLARLWKHANPGG PIYFLKGLSHLHILNLESNGF
Mouse ILDFQHNNLARLWKRANPGG PVNFLKGLSHLHILNLESNGL
Bovine ILDLQHNNLARLWKHANPGG PVQFLKGLFHLHILNLGSNGF
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
24 – 904 Toll-like receptor 3
24 – 704 Lumenal
539 – 539 H -> A. No effect.
539 – 539 H -> E. Loss of RNA binding. Constitutive activation of NF-kappa-B.
541 – 541 N -> A. Loss of RNA binding. Abolishes activation of NF-kappa-B.
TLR3 deficiency in patients with herpes simplex encephalitis.
Zhang S.-Y.; Jouanguy E.; Ugolini S.; Smahi A.; Elain G.; Romero P.; Segal D.; Sancho-Shimizu V.; Lorenzo L.; Puel A.; Picard C.; Chapgier A.; Plancoulaine S.; Titeux M.; Cognet C.; von Bernuth H.; Ku C.-L.; Casrouge A.; Zhang X.-X.; Barreiro L.; Leonard J.; Hamilton C.; Lebon P.; Heron B.; Vallee L.; Quintana-Murci L.; Hovnanian A.; Rozenberg F.; Vivier E.; Geissmann F.; Tardieu M.; Abel L.; Casanova J.-L.;
Cited for: VARIANT IIAE2 SER-554;
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