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UniProtKB/Swiss-Prot variant pages

UniProtKB/Swiss-Prot P16157: Variant p.Ile1054Thr

Ankyrin-1
Gene: ANK1
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Variant information Variant position: help 1054 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Type of variant: help LP/P [Disclaimer] The variants are classified into three categories: LP/P, LB/B and US.
  • LP/P: likely pathogenic or pathogenic.
  • LB/B: likely benign or benign.
  • US: uncertain significance

Residue change: help From Isoleucine (I) to Threonine (T) at position 1054 (I1054T, p.Ile1054Thr). Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.
Physico-chemical properties: help Change from medium size and hydrophobic (I) to medium size and polar (T) The physico-chemical property of the reference and variant residues and the change implicated.
BLOSUM score: help -1 The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another:
  • Lowest score: -4 (low probability of substitution).
  • Highest score: 11 (high probability of substitution).
More information can be found on the following page

Variant description: help In SPH1. Any additional useful information about the variant.


Sequence information Variant position: help 1054 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: help 1881 The length of the canonical sequence.
Location on the sequence: help NGMDEELGSLEELEKKRVCR I ITTDFPLYFVIMSRLCQDYD The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: help The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human                         NGMDEELGSLEELEKKRVCRIITTDFPLYFVIMSRLCQDYD

Mouse                         NGMDEELGSLEELEKKRVCRIITTDFPLYFVIMSRLCQDYD

Sequence annotation in neighborhood: help The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
  • Type: the type of sequence feature.
  • Positions: endpoints of the sequence feature.
  • Description: contains additional information about the feature.
TypePositionsDescription
Chain 1 – 1881 Ankyrin-1
Domain 913 – 1068 ZU5 1
Modified residue 1073 – 1073 Phosphotyrosine
Alternative sequence 1 – 1725 Missing. In isoform Mu17, isoform Mu18, isoform Mu19, isoform Mu20, isoform 22 and isoform 23.
Beta strand 1051 – 1058



Literature citations
Low frequency of ankyrin mutations in hereditary spherocytosis: identification of three novel mutations.
Leite R.C.A.; Basseres D.S.; Ferreira J.S.; Alberto F.L.; Costa F.F.; Saad S.T.O.;
Hum. Mutat. 16:529-529(2000)
Cited for: VARIANTS SPH1 ARG-276 AND THR-1054;
Disclaimer: Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.