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UniProtKB/Swiss-Prot P02765: Variant p.Val142Leu

Alpha-2-HS-glycoprotein
Gene: AHSG
Chromosomal location: 3q27
Variant information

Variant position:  142
The position of the amino-acid change on the UniProtKB canonical protein sequence.

Type of variant:  Polymorphism
The variants are classified into three categories: Disease, Polymorphism and Unclassified.
  • Disease: Variants implicated in disease according to literature reports.
  • Polymorphism: Variants not reported to be implicated in disease.
  • Unclassified: Variants with uncertain implication in disease according to literature reports. Evidence against or in favor of a pathogenic role is limited and/or conflicting.

Residue change:  From Valine (V) to Leucine (L) at position 142 (V142L, p.Val142Leu).
Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.

Physico-chemical properties:  Similar physico-chemical property. Both residues are medium size and hydrophobic.
The physico-chemical property of the reference and variant residues and the change implicated.

BLOSUM score:  1
The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another:
  • Lowest score: -4 (low probability of substitution).
  • Highest score: 11 (high probability of substitution).
More information can be found on the following page

Polymorphism:  There are two common alleles, AHSG*1 and AHSG*2. AHSG*1 has Thr-248/Thr-256; AHSG*2 has Met-248/Ser-256.
Additional information on the polymorphism described.

Other resources:  
Links to websites of interest for the variant.



Sequence information

Variant position:  142
The position of the amino-acid change on the UniProtKB canonical protein sequence.

Protein sequence length:  367
The length of the canonical sequence.

Location on the sequence:   DGKFSVVYAKCDSSPDSAED  V RKVCQDCPLLAPLNDTRVVH
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.

Residue conservation: 
The multiple alignment of the region surrounding the variant against various orthologous sequences.

Human                         DGKFSVVYAKCDSSPDSAEDVRKVCQDCPLLAPLNDTRVVH

Chimpanzee                    DGKFSVVYAKCDSSPDSAEDVRKVCQDCPLLAPLNDTRVVH

Mouse                         DGQFRVMHTQCHSTPDSAEDVRKLCPRCPLLTPFNDTNVVH

Rat                           DGQFRVLHAQCHSTPDSAEDVRKFCPRCPILIRFNDTNVVH

Bovine                        DGQFSVLFTKCDSSPDSAEDVRKLCPDCPLLAPLNDSRVVH

Sheep                         DGQFSVLFTKCDSSPDSAEDVRKLCPDCPLLAPLNNSQVVH

Sequence annotation in neighborhood:  
The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
  • Type: the type of sequence feature.
  • Positions: endpoints of the sequence feature.
  • Description: contains additional information about the feature.

TypePositionsDescription
Chain 19 – 300 Alpha-2-HS-glycoprotein chain A
Modified residue 134 – 134 Phosphoserine
Modified residue 135 – 135 Phosphoserine; by FAM20C
Modified residue 138 – 138 Phosphoserine; by FAM20C
Glycosylation 156 – 156 N-linked (GlcNAc...) (complex) asparagine
Disulfide bond 32 – 358 Interchain (between A and B chains)


Literature citations

No reference for the current variant in UniProtKB/Swiss-Prot.

Disclaimer: Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.