Variant position: 373 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 865 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human LDGLVQQGYQSLNDIPDRVQ RQTTTVVAGIKRVLNSIGSDI
Mouse LESLVKRGYTTIDEIPNTIQ NQTVDVIKDVKNTLDSISSNI
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
20 – 865 Prominin-1
179 – 433 Extracellular
Mutant prominin 1 found in patients with macular degeneration disrupts photoreceptor disk morphogenesis in mice.
Yang Z.; Chen Y.; Lillo C.; Chien J.; Yu Z.; Michaelides M.; Klein M.; Howes K.A.; Li Y.; Kaminoh Y.; Chen H.; Zhao C.; Chen Y.; Al-Sheikh Y.T.; Karan G.; Corbeil D.; Escher P.; Kamaya S.; Li C.; Johnson S.; Frederick J.M.; Zhao Y.; Wang C.; Cameron D.J.; Huttner W.B.; Schorderet D.F.; Munier F.L.; Moore A.T.; Birch D.G.; Baehr W.; Hunt D.M.; Williams D.S.; Zhang K.;
J. Clin. Invest. 118:2908-2916(2008)
Cited for: INVOLVEMENT IN CORD12; INVOLVEMENT IN STGD4; INVOLVEMENT IN MCDR2; VARIANT CORD12/STGD4/MCDR2 CYS-373; INTERACTION WITH CDHR1 AND ACTIN; CHARACTERIZATION OF VARIANT CORD12/STGD4/MCDR2 CYS-373;
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.