Variant position: 197 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 1464 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human VPGPMGPSGPRGLPGPPGAP GPQGFQGPPGEPGEPGASGPM
Mouse VPGPMGPSGPRGLPGPPGAP GPQGFQGPPGEPGEPGGSGPM
Rat VPGPMGPSGPRGLPGPPGAP GPQGFQGPPGEPGEPGASGPM
Bovine VPGPMGPSGPRGLPGPPGAP GPQGFQGPPGEPGEPGASGPM
Chicken VPGPMGPAGPRGLPGPPGAP GPQGFQGPPGEPGEPGASGPM
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
162 – 1218 Collagen alpha-1(I) chain
179 – 1192 Triple-helical region
190 – 190 4-hydroxyproline
193 – 193 4-hydroxyproline
196 – 196 4-hydroxyproline
205 – 205 4-hydroxyproline
208 – 208 4-hydroxyproline
211 – 211 4-hydroxyproline
Mutation analysis of COL1A1 and COL1A2 in patients diagnosed with osteogenesis imperfecta type I-IV.
Pollitt R.; McMahon R.; Nunn J.; Bamford R.; Afifi A.; Bishop N.; Dalton A.;
Hum. Mutat. 27:716-716(2006)
Cited for: VARIANTS OI2 ARG-22; ARG-581; VAL-734 AND ASN-1413; VARIANTS OI4 ARG-197 AND CYS-338; VARIANTS OI1 VAL-320; ARG-555; SER-647 AND GLU-1219; VARIANTS ALA-205; LYS-288; SER-906 AND HIS-1356;
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.