Variant position: 188 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 305 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human WLEMTEMDWPPDSCCVREFP GCSKQAHQEDLSDLYQEGCGK
Mouse WLEMTEMDWPPDSCCVREFP GCSKQAHQEDLSDLYQEGCGK
Rat WLEMTEMDWPPDSCCVREFP GCSKQAHQEDLSDLYQEGCGK
Bovine WLEMTEMDWPPDSCCVREFP GCSKQAHQEDLSDLYQEGCGK
Chicken WLEMTEMDWPPDSCCVREFP GCSKQAHHEDLSDLYQEGCGK
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
1 – 305 Tetraspanin-12
111 – 224 Extracellular
Next-generation sequencing of a 40 Mb linkage interval reveals TSPAN12 mutations in patients with familial exudative vitreoretinopathy.
Nikopoulos K.; Gilissen C.; Hoischen A.; van Nouhuys C.E.; Boonstra F.N.; Blokland E.A.; Arts P.; Wieskamp N.; Strom T.M.; Ayuso C.; Tilanus M.A.; Bouwhuis S.; Mukhopadhyay A.; Scheffer H.; Hoefsloot L.H.; Veltman J.A.; Cremers F.P.; Collin R.W.;
Am. J. Hum. Genet. 86:240-247(2010)
Cited for: VARIANTS EVR5 ARG-188 AND PRO-237;
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