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UniProtKB/Swiss-Prot variant pages

UniProtKB/Swiss-Prot Q9H8M5: Variant p.Thr568Ile

Metal transporter CNNM2
Gene: CNNM2
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Variant information Variant position: help 568 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Type of variant: help LP/P [Disclaimer] The variants are classified into three categories: LP/P, LB/B and US.
  • LP/P: likely pathogenic or pathogenic.
  • LB/B: likely benign or benign.
  • US: uncertain significance
Residue change: help From Threonine (T) to Isoleucine (I) at position 568 (T568I, p.Thr568Ile). Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.
Physico-chemical properties: help Change from medium size and polar (T) to medium size and hydrophobic (I) The physico-chemical property of the reference and variant residues and the change implicated.
BLOSUM score: help -1 The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another:
  • Lowest score: -4 (low probability of substitution).
  • Highest score: 11 (high probability of substitution).
More information can be found on the following page
Variant description: help In HOMG6; reduced activity; electrophysiological analysis shows that magnesium-sensitive sodium currents are significantly diminished and are blocked by increased extracellular magnesium concentrations. Any additional useful information about the variant.
Other resources: help Links to websites of interest for the variant.


Sequence information Variant position: help 568 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: help 875 The length of the canonical sequence.
Location on the sequence: help VQRVNNEGEGDPFYEVLGIV T LEDVIEEIIKSEILDETDLY The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: help The multiple alignment of the region surrounding the variant against various orthologous sequences. 
Human                         VQRVNN----------EGEGDPFY-----------------------EVLGIVTLEDVIEEIIKSEILDETDLY-

Mouse                         VQRVNN----------EGEGDPFY-----------------

Rat                           VQRVNN----------EGEGDPFY-----------------

Caenorhabditis elegans        VAKATEVKKHHHGKFADGTVDSFILKSMKLVEATMMPQVEN
Sequence annotation in neighborhood: help The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
  • Type: the type of sequence feature.
  • Positions: endpoints of the sequence feature.
  • Description: contains additional information about the feature.
TypePositionsDescription
Chain 1 – 875 Metal transporter CNNM2
Topological domain 390 – 875 Cytoplasmic
Domain 518 – 584 CBS 2
Alternative sequence 553 – 875 Missing. In isoform 3.
Beta strand 560 – 568



Literature citations
CNNM2, encoding a basolateral protein required for renal Mg2+ handling, is mutated in dominant hypomagnesemia.
Stuiver M.; Lainez S.; Will C.; Terryn S.; Gunzel D.; Debaix H.; Sommer K.; Kopplin K.; Thumfart J.; Kampik N.B.; Querfeld U.; Willnow T.E.; Nemec V.; Wagner C.A.; Hoenderop J.G.; Devuyst O.; Knoers N.V.; Bindels R.J.; Meij I.C.; Muller D.;
Am. J. Hum. Genet. 88:333-343(2011)
Cited for: TISSUE SPECIFICITY; VARIANT HOMG6 ILE-568; CHARACTERIZATION OF VARIANT HOMG6 ILE-568; VARIANT GLN-38;
Disclaimer: Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.