Variant position: 524 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 796 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human DQQYLILNTARKHFGAGGNQ RIRFTLPPLVFAAYQLAFRYK
Mouse DQQYLILNTARKHFGAGGNQ RIRFTLPPLVFAAYQLAFRYK
Bovine DQQYLILNTARKHFGAGGNQ RIRFTLPPLVFAAYQLAFRYK
Slime mold EKLFKIYIIARGHFGKGGPH RIRHTLVPLVFCSLRFIRNFK
Baker's yeast EAQLEILLLIKSSFIKGGIN -VKYTFPAIITNFWKLMRKCR
Fission yeast QIQIEILRSLKDTFIKAGEN -VKYLLPVVVNRCIFLARNFR
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
1 – 796 Vacuolar protein sorting-associated protein 35
438 – 796 Interaction with SLC11A2
500 – 693 Interaction with IGF2R cytoplasmic domain
521 – 528
A mutation in VPS35, encoding a subunit of the retromer complex, causes late-onset Parkinson disease.
Zimprich A.; Benet-Pages A.; Struhal W.; Graf E.; Eck S.H.; Offman M.N.; Haubenberger D.; Spielberger S.; Schulte E.C.; Lichtner P.; Rossle S.C.; Klopp N.; Wolf E.; Seppi K.; Pirker W.; Reinthaler E.; Harutyunyan A.; Kralovics R.; Peters A.; Zimprich F.; Brucke T.; Poewe W.; Auff E.; Trenkwalder C.; Rost B.; Ransmayr G.; Winkelmann J.; Meitinger T.; Strom T.M.;
Am. J. Hum. Genet. 89:168-175(2011)
Cited for: VARIANT PARK17 ASN-620; VARIANTS SER-51; ILE-57; ARG-82; MET-241; TRP-524 AND MET-774;
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.