Variant position: 401 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 654 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human VLHPQYRTSQPIKADVLFIH GLMGAAFKTWRQQDSEQAVIE
Mouse VLHPQCRTSQPIKADVLFIH GLMGAAFKTWRQHDSQRALTE
Bovine VLHPQYRTSQPIKADVLFIH GLMGAAFKTWRQQDNDQDLTE
Zebrafish ILHPQCRTNQPIKADVLFVH GLLGAAFKTWRQKDCDVTDDE
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
1 – 654 Protein SERAC1
168 – 654 Missing. In isoform 3.
Mutations in the phospholipid remodeling gene SERAC1 impair mitochondrial function and intracellular cholesterol trafficking and cause dystonia and deafness.
Wortmann S.B.; Vaz F.M.; Gardeitchik T.; Vissers L.E.; Renkema G.H.; Schuurs-Hoeijmakers J.H.; Kulik W.; Lammens M.; Christin C.; Kluijtmans L.A.; Rodenburg R.J.; Nijtmans L.G.; Grunewald A.; Klein C.; Gerhold J.M.; Kozicz T.; van Hasselt P.M.; Harakalova M.; Kloosterman W.; Baric I.; Pronicka E.; Ucar S.K.; Naess K.; Singhal K.K.; Krumina Z.; Gilissen C.; van Bokhoven H.; Veltman J.A.; Smeitink J.A.; Lefeber D.J.; Spelbrink J.N.; Wevers R.A.; Morava E.; de Brouwer A.P.;
Nat. Genet. 44:797-802(2012)
Cited for: VARIANTS MEGDEL ASP-401; GLU-404; LEU-479 DEL AND THR-498; FUNCTION; SUBCELLULAR LOCATION; TISSUE SPECIFICITY;
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.