Variant position: 56 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 465 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human VPADQLRVIFAGKELRNDWT VQNCDLDQQSIVHIVQRPWRK
Mouse VPADQLRVIFAGKELPNHLT VQNCDLEQQSIVHIVQRPRRR
Rat VPADQLRVIFAGKELQNHLT VQNCDLEQQSIVHIVQRPQRK
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
1 – 465 E3 ubiquitin-protein ligase parkin
1 – 76 Ubiquitin-like
65 – 65 Phosphoserine; by PINK1
1 – 191 Missing. In isoform 4.
1 – 79 Missing. In isoform 3.
65 – 65 S -> A. Loss of phosphorylation. Undergoes autoubiquitination in the presence of phosphorylated ubiquitin.
65 – 65 S -> E. Phosphomimetic mutant; still requires PINK1 for activation. PRKN is activated in presence of phosphorylated ubiquitin.
56 – 59
Molecular findings in familial Parkinson disease in Spain.
Hoenicka J.; Vidal L.; Morales B.; Ampuero I.; Jimenez-Jimenez F.J.; Berciano J.; del Ser T.; Jimenez A.; Ruiz P.G.; de Yebenes J.G.;
Arch. Neurol. 59:966-970(2002)
Cited for: VARIANTS PARK2 GLU-56 AND TYR-212;
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