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UniProtKB/Swiss-Prot variant pages

UniProtKB/Swiss-Prot O60762: Variant p.Gly152Val

Dolichol-phosphate mannosyltransferase subunit 1
Gene: DPM1
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Variant information Variant position: help 152 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Type of variant: help LP/P [Disclaimer] The variants are classified into three categories: LP/P, LB/B and US.
  • LP/P: likely pathogenic or pathogenic.
  • LB/B: likely benign or benign.
  • US: uncertain significance

Residue change: help From Glycine (G) to Valine (V) at position 152 (G152V, p.Gly152Val). Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.
Physico-chemical properties: help Change from glycine (G) to medium size and hydrophobic (V) The physico-chemical property of the reference and variant residues and the change implicated.
BLOSUM score: help -3 The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another:
  • Lowest score: -4 (low probability of substitution).
  • Highest score: 11 (high probability of substitution).
More information can be found on the following page

Variant description: help In CDG1E; abolishes interaction with DPM3. Any additional useful information about the variant.
Other resources: help Links to websites of interest for the variant.


Sequence information Variant position: help 152 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: help 260 The length of the canonical sequence.
Location on the sequence: help IRKQKEGNFDIVSGTRYKGN G GVYGWDLKRKIISRGANFLT The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: help The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human                         IRKQKEGNFDIVSGTRYKGNGGV-YGWDLKRKIISRGANFLT

Mouse                         IRKQKEGNFDIVSGTRYKGNGGV-YGWDLKRKIISRGANFI

Pig                           IRKQKEGNFDIVSGTRYKGNGGV-YGWDLKRKIISRGANFI

Bovine                        IRKQKEGNFDIVSGTRYKGNGGV-YGWDLKRKIISRVANFI

Drosophila                    IKLQQEGNYDIVSGTRYAGNGGV-FGWDFKRKLISRGANFL

Slime mold                    IEKQKKLNCEIVTGTRYQSGGGV-FGWNLYRKLTSRVANYI

Baker's yeast                 FESLHDHAFTL--GTRYAPGVGIDKDWPMYRRVISSTARMM

Fission yeast                 IKLQKEHNYDIVLGTRYAKDGGV-YGWNLKRKFISRGANLL

Sequence annotation in neighborhood: help The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
  • Type: the type of sequence feature.
  • Positions: endpoints of the sequence feature.
  • Description: contains additional information about the feature.
TypePositionsDescription
Chain 2 – 260 Dolichol-phosphate mannosyltransferase subunit 1
Binding site 147 – 147



Literature citations
Congenital disorder of glycosylation due to DPM1 mutations presenting with dystroglycanopathy-type congenital muscular dystrophy.
Yang A.C.; Ng B.G.; Moore S.A.; Rush J.; Waechter C.J.; Raymond K.M.; Willer T.; Campbell K.P.; Freeze H.H.; Mehta L.;
Mol. Genet. Metab. 110:345-351(2013)
Cited for: VARIANT CDG1E VAL-152; CHARACTERIZATION OF VARIANT CDG1E VAL-152;
Disclaimer: Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.