Sequence information
Variant position: 1773 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 2201 The length of the canonical sequence.
Location on the sequence:
SMVTVDGTKTQTRLVKLIPG
V EYLVSIIAMKGFEESEPVSG
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human SMVTV--------------DGTKTQTRLVK---LIPGV EYLVSIIAMKGFEESEPVSG
Mouse SMVTV--------------DGTDTETRLVK---LTPGV EYR
Pig SVVTV--------------DGTKTQTRLLR---LLPGV EYL
Chicken NVVTV--------------DGSKTRTKLVK---LVPGV DYN
Drosophila SLIGQFRFSQPAQNQTQLHDGTASFTRTVDGRFQTQRM ALA
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Literature citations
Exome sequencing and linkage analysis identified tenascin-C (TNC) as a novel causative gene in nonsyndromic hearing loss.
Zhao Y.; Zhao F.; Zong L.; Zhang P.; Guan L.; Zhang J.; Wang D.; Wang J.; Chai W.; Lan L.; Li Q.; Han B.; Yang L.; Jin X.; Yang W.; Hu X.; Wang X.; Li N.; Li Y.; Petit C.; Wang J.; Wang H.Y.; Wang Q.;
PLoS ONE 8:E69549-E69549(2013)
Cited for: VARIANTS DFNA56 MET-1773 AND SER-1796;
Disclaimer:
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.