Variant position: 66 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 432 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human LPT---------------RVDFSLAGALNAGFKET RASERAEMMELNDRFASYIEK
Mouse LPA---------------RVDFSLAGALNAGFKET RASERA
Rat LPA---------------RVDFSLAGALNAGFKET RASERA
Bovine LPA---------------RVDFSLAGALNSGFKET RASERA
Zebrafish LTSSPLTLSTSRLSLGGERLDFSADSLLKAQYRET RTNEKV
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
1 – 432 Glial fibrillary acidic protein
1 – 72 Head
82 – 82 Phosphoserine
GFAP mutations, age at onset, and clinical subtypes in Alexander disease.
Prust M.; Wang J.; Morizono H.; Messing A.; Brenner M.; Gordon E.; Hartka T.; Sokohl A.; Schiffmann R.; Gordish-Dressman H.; Albin R.; Amartino H.; Brockman K.; Dinopoulos A.; Dotti M.T.; Fain D.; Fernandez R.; Ferreira J.; Fleming J.; Gill D.; Griebel M.; Heilstedt H.; Kaplan P.; Lewis D.; Nakagawa M.; Pedersen R.; Reddy A.; Sawaishi Y.; Schneider M.; Sherr E.; Takiyama Y.; Wakabayashi K.; Gorospe J.R.; Vanderver A.;
Cited for: VARIANTS ALXDRD GLN-66; LYS-72; GLU-86; THR-236; GLN-371; VAL-371 AND GLY-376;
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