Sequence information
Variant position: 112 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 456 The length of the canonical sequence.
Location on the sequence:
FFRQSWKDERLKFKGPMTVL
R LNNLMASKIWTPDTFFHNGK
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human FFRQSWKDERLKFKGPMTVLR LNNLMASKIWTPDTFFHNGK
Mouse FFRQSWKDERLKFKGPMTVLR LNNLMASKIWTPDTFFHNGK
Rat FFRQSWKDERLKFKGPMTVLR LNNLMASKIWTPDTFFHNGK
Bovine FFRQSWKDERLKFKGPMTVLR LNNLMASKIWTPDTFFHNGK
Chicken FFRQSWKDERLKFKGPMTVLR LNNLMASKIWTPDTFFHNGK
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
Chain
28 – 456
Gamma-aminobutyric acid receptor subunit alpha-1
Topological domain
28 – 251
Extracellular
Beta strand
109 – 113
Literature citations
GABRA1 and STXBP1: novel genetic causes of Dravet syndrome.
Carvill G.L.; Weckhuysen S.; McMahon J.M.; Hartmann C.; Moller R.S.; Hjalgrim H.; Cook J.; Geraghty E.; O'Roak B.J.; Petrou S.; Clarke A.; Gill D.; Sadleir L.G.; Muhle H.; von Spiczak S.; Nikanorova M.; Hodgson B.L.; Gazina E.V.; Suls A.; Shendure J.; Dibbens L.M.; De Jonghe P.; Helbig I.; Berkovic S.F.; Scheffer I.E.; Mefford H.C.;
Neurology 82:1245-1253(2014)
Cited for: INVOLVEMENT IN DEE19; VARIANTS DEE19 GLN-112; SER-251 AND THR-306;
Disclaimer:
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.