Variant position: 864 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 1603 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human NRPEEEDQYWLSMGRTFHKV TLKDKMITVTRYLPKYPYESA
Mouse NRPEEEGQYWLSMGRTFHKV TLKDKMITVTRYLPKYPYESA
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
1 – 1603 GATOR complex protein DEPDC5
560 – 1603 Missing. In isoform 2.
A recurrent mutation in DEPDC5 predisposes to focal epilepsies in the French-Canadian population.
Martin C.; Meloche C.; Rioux M.F.; Nguyen D.K.; Carmant L.; Andermann E.; Gravel M.; Cossette P.;
Clin. Genet. 86:570-574(2014)
Cited for: VARIANT FFEVF1 MET-864;
Preliminary functional assessment and classification of DEPDC5 variants associated with focal epilepsy.
van Kranenburg M.; Hoogeveen-Westerveld M.; Nellist M.;
Hum. Mutat. 36:200-209(2015)
Cited for: VARIANTS FFEVF1 ILE-90; LEU-272; VAL-452; GLN-485; MET-864; ARG-1073 AND GLY-1162; CHARACTERIZATION OF VARIANTS FFEVF1 ILE-90; LEU-272; VAL-452; GLN-485; MET-864; ARG-1073 AND GLY-1162; IDENTIFICATION IN GATOR COMPLEX;
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